Electrochemical Aptasensor for Detection of Dopamine

This work presents a proof of concept of a novel, simple, and sensitive method of detection of dopamine, a neurotransmitter within the human brain. We propose a simple electrochemical method for the detection of dopamine using a dopamine-specific aptamer labeled with an electrochemically active ferrocene tag. Aptamers immobilized on the surface of gold screen-printed gold electrodes via thiol groups can change their secondary structure by wrapping around the target molecule. As a result, the ferrocene labels move closer to the electrode surface and subsequently increase the electron transfer. The cyclic voltammograms and impedance spectra recorded on electrodes in buffer solutions containing different concentration of dopamine showed, respectively, the increase in both the anodic and cathodic currents and decrease in the double layer resistance upon increasing the concentration of dopamine from 0.1 to 10 nM L-1. The high affinity of aptamer-dopamine binding (KD ≈ 5 nM) was found by the analysis of the binding kinetics. The occurrence of aptamer-dopamine binding was directly confirmed with spectroscopic ellipsometry measurements

Electrochemical inhibition bacterial sensor array for detection of water pollutants: artificial neural network (ANN) approach

This work reports on further development of an inhibition electrochemical sensor array based on immobilized bacteria for the preliminary detection of a wide range of organic and inorganic pollutants, such as heavy metal salts (HgCl2, PbCl2, CdCl2), pesticides (atrazine, simazine, DDVP), and petrochemicals (hexane, octane, pentane, toluene, pyrene, and ethanol) in water. A series of DC and AC electrochemical measurements, e.g., cyclic voltammograms and impedance spectroscopy, were carried out on screen-printed gold electrodes with three types of bacteria, namely Escherichia coli, Shewanella oneidensis, and Methylococcus capsulatus, immobilized via poly L-lysine. The results obtained showed a possibility of pattern recognition of the above pollutants by their inhibition effect on the three bacteria used. The analysis of a large amount of experimental data was carried out using an artificial neural network (ANN) programme for more accurate identification of pollutants as well as the estimation of their concentration. The results are encouraging for the development of a simple and cost-effective biosensing technology for preliminary in-field analysis (screening) of water samples for the presence of environmental pollutants

Development of novel and highly specific ssDNA-Aptamer-based electrochemical biosensor for rapid detection of Mercury (II) and Lead (II) ions in water

In this work, we report on the development of an electrochemical biosensor for high selectivity and rapid detection of Hg2+ and Pb2+ ions using DNA-based specific aptamer probes labeled with ferrocene (or methylene blue) and thiol groups at their 5′ and 3′ termini, respectively. Aptamers were immobilized onto the surface of screen-printed gold electrodes via the SH (thiol) groups, and then cyclic voltammetry and impedance spectra measurements were performed in buffer solutions with the addition of HgCl2 and PbCl2 salts at different concentrations. Changes in 3D conformation of aptamers, caused by binding their respective targets, e.g., Hg2+ and Pb2+ ions, were accompanied by an increase in the electron transfer between the redox label and the electrode. Accordingly, the presence of the above ions can be detected electrochemically. The detection of Hg2+ and Pb2+ ions in a wide range of concentrations as low as 0.1 ng/mL (or 0.1 ppb) was achieved. The study of the kinetics of aptamer/heavy metal ions binding gave the values of the affinity constants of approximately 9.10−7 mol, which proved the high specificity of the aptamers used

Electrochemical Biosensor Arrays Utilising Bacteria and Aptamer Nano-bioreceptors for Toxic Chemicals Detection

This work was dedicated to development of novel biosensing technologies for detection of toxic chemicals, such as heavy metals, pesticides and petrochemicals, which possess a serious threat to humans and all living organisms in our planet nowadays. This was the main motivation for research in such important field. In the present work a novel approach in detection of heavy metal salts (HgCl2, PbCl2, ZnCl2 and CdCl2), pesticides (atrazine, simazine, DDVP), and petro-chemicals (hexane, octane, pentane, toluene, pyrene and ethanol) dissolved in water was proposed. It is based on a concept of inhibition sensor array utilising different whole bacteria cells. The main aim of this project is to develop novel, simple and cost-effective biosensing technologies for in-field detection of the above pollutants in water which effectively reduce the time and cost of analysis. Electrochemical detection appeared to be the most suitable for such task. In this project, three types of bacteria, e.g. Escherichia coli, Methylococcus capsulatus (Bath) or Methylosinus trichosporium (OB3b) and Shewanella oneidensis, were selected because of their different inhibition patterns. The concentration of live bacteria (which is an indicator of the presence of pollutants) was first characterised by the optical analytical methods of optical density OD600, fluorescence microscopy and flow cytometry. The main findings of this study were the facts that E. coli (K12 strain, gram-negative bacteria) are very sensitive to all above mentioned pollutants; methanotrophic bacteria (Mc. capsulatus Bath & Ms. trichosporium OB3b) appeared to be more resistant to petrochemicals; while S. oneidensis (MR-1 strain, gram negative bacteria) are more tolerant to heavy metals. A series of AC and DC electrochemical measurements were carried out on the same bacteria samples. As a first step, a correlation between optical and electrochemical characteristics of bacteria concentration in solution was established. The study of the effect of heavy metals, pesticides and petrochemicals on DC and electrical characteristics of bacteria in suspension revealed a similar inhibition pattern as was found in optical study. Then a similar study was carried out on samples of bacteria immobilized on the surface of screen-printed electrodes, which is more suitable for sensing applications. The results of DC (cyclic voltammograms) and AC (impedance spectroscopy) measurements were consistent with previous studies. A possibility of pattern recognition of pollutants by their inhibition effects on the selected bacteria was found. The classes of pollutants, e.g. heavy metals, pesticides, and petrochemicals, can be identified from pseudo-3D graphs of responses of the three sensing channels, e.g. electrodes with different immobilized bacteria. Much more accurate assessment of pollutants was achieved with Artificial Neural Network (ANN) software which was developed using MatLab. ANN programme was capable of both the identification of pollutants with 91% accuracy and rough estimation of their concentrations in five bands from 0.01 ng/ml to 1000 ng/ml (ppb). The developed bacteria sensor array could be suitable for simple, inexpensive, and quick preliminary in-field detection (screening) of water samples. The suspected highly contaminated samples could be easily identified and passed to specialized laboratories for further more detailed testing. In such way, the time and cost of analysis could be substantially reduced. In addition to the inhibition sensor array utilising non-specific bio-receptors such as bacteria, the electrochemical detection of heavy metal ions (Hg2+ and Pb2+) was attempted using novel highly specific aptamer bio-receptors labelled with redox groups. Such experiments were successful; the above metal ions in very low concentrations down to 1 pg/ml (or 1 ppt) were detected using both cyclic voltammograms and impedance spectroscopy. The affinity of the aptamers used was found to be very high and similar to that of antibodies. Additional advantages of aptamers were their high stability and simple recovery by thermo-cycling. Considering fast evolvement of aptamer research, their advantages and low cost, the development of aptasensor arrays for accurate detection of large number of pollutants is possible in near future

Electrochemical Detection of Prostate Cancer Biomarker PCA3 Using Specific RNA-Based Aptamer Labelled with Ferrocene

This paper reports on a feasibility study of electrochemical in-vitro detection of prostate cancer biomarker PCA3 (prostate cancer antigen 3) in direct assay with specific RNA aptamer labelled with a redox group (ferrocene) and immobilized on a screen-printed gold electrode surface. The cyclic voltammograms and electrochemical impedance spectroscopy methods yield encouraging results on the detection of PCA3 in a range of concentrations from 1 μg/mL down to 0.1 ng/mL in buffer solutions. Both anodic and cathodic current values in cyclic voltammograms measurements and charge transfer resistance values in electrochemical impedance spectroscopy experiments correlate with the PCA3 concentration in the sample. Kinetics studies of the binding of the PCA3 to our aptamer demonstrated high specificity of the reaction with a characteristic affinity constant of approximately 4·10−10 molar. The results of this work provide a background for the future development of novel, highly sensitive and cost-effective diagnostic methodologies for prostate cancer detection

Metal sulfide sub-nanometer clusters formed within calix(8)arene Langmuir-Blodgett films

This work describes the construction of layered Langmuir-Blodgett (LB) films of a calixarene and the use of these as matrices for the synthesis of a range of metal sulfide nanoparticles. CuS, CdS, HgS, and PbS nano-clusters were formed within LB films of an octa-tertbutyl-calix(8)arene substituted with carboxylic acid groups deposited on different substrates (glass, quartz, and silicon) from either: (i) aqueous sub-phases containing 0.5 mM of the respective metal chloride salt (e.g. CuCl2, CdCl2, HgCl2, PbCl2), or (ii) by soaking the LB films in 10 mM solutions of the above salts for 1 h. The formation of metal-sulfide (MeS) nanoparticles was then achieved by exposing samples to H2S gas for 10–12 h. Deposition from salt containing subphases was more reliable and resulted in stoichiometric metal sulfides (CdS, HgS, PbS) being formed within LB films of the calix(8)arene carboxylic acid whereas Cu tended to form polysulfides. UV–vis absorption spectroscopy showed the presence of multiple absorption bands corresponding to electron transitions between energy levels in nanoclusters formed as result of quantum confinement of electrons and holes. The MeS clusters obtained by this process are amongst the smallest reported for LB films, being of the range 0.6–1.2 nm

Utilization of natural dyes from Zingiber officinale leaves and Clitoria ternatea flowers to prepare new photosensitisers for dye-sensitised solar cells

Chlorophyll and ternatin were extracted from Zingiber officinale leaves and Clitoria ternatea flowers respectively. These natural dyes were applied as sensitisers in TiO2-based dye-sensitised solar cells (DSSCs). Among 10 different solvents, the ethanol extracts revealed the highest absorption spectra of natural dyes extracted from Z. officinale and C. ternatea. A major effect of temperature increase was the increased extraction yield. High chlorophyll and ternatin yields were obtained under extraction temperatures of 80 °C and 70 °C, respectively. A notable decrease in C. ternatea dye concentration at temperatures >70 °C was also observed. High dye concentrations were obtained using acidic extraction solutions, particularly those with a pH value of 4. Experimental results showed that the DSSC fabricated with chlorophyll extracted from Z. officinale leaves exhibited a conversion efficiency of 0.30%, open-circuit voltage (Voc) of 0.56 V, short-circuit current (Isc) of 0.8 mA/cm−2 and fill factor (FF) of 57.93%. The DSSC sensitized with ternatin from C. ternatea flowers displayed a conversion efficiency of 0.13%, Voc of 0.54 V, Isc of 0.3 mA/cm−2 and FF of 81.82%

Systematic review of the safety of medication use in inpatient, outpatient and primary care settings in the Gulf Cooperation Council countries

Background Errors in medication use are a patient safety concern globally, with different regions reporting differing error rates, causes of errors and proposed solutions. The objectives of this review were to identify, summarise, review and evaluate published studies on medication errors, drug related problems and adverse drug events in the Gulf Cooperation Council (GCC) countries. Methods A systematic review was carried out using six databases, searching for literature published between January 1990 and August 2016. Research articles focussing on medication errors, drug related problems or adverse drug events within different healthcare settings in the GCC were included. Results Of 2094 records screened, 54 studies met our inclusion criteria. Kuwait was the only GCC country with no studies included. Prescribing errors were reported to be as high as 91% of a sample of primary care prescriptions analysed in one study. Of drug-related admissions evaluated in the emergency department the most common reason was patient non-compliance. In the inpatient care setting, a study of review of patient charts and medication orders identified prescribing errors in 7% of medication orders, another reported prescribing errors present in 56% of medication orders. The majority of drug related problems identified in inpatient paediatric wards were judged to be preventable. Adverse drug events were reported to occur in 8.5–16.9 per 100 admissions with up to 30% judged preventable, with occurrence being highest in the intensive care unit. Dosing errors were common in inpatient, outpatient and primary care settings. Omission of the administered dose as well as omission of prescribed medication at medication reconciliation were common. Studies of pharmacists’ interventions in clinical practice reported a varying level of acceptance, ranging from 53% to 98% of pharmacists’ recommendations. Conclusions Studies of medication errors, drug related problems and adverse drug events are increasing in the GCC. However, variation in methods, definitions and denominators preclude calculation of an overall error rate. Research with more robust methodologies and longer follow up periods is now required.Peer reviewe

Highly sensitive label-free in vitro detection of aflatoxin B1 in an aptamer assay using optical planar waveguide operating as a polarization interferometer

This work reports on further development of an optical biosensor for the in vitro detection of mycotoxins (in particular, aflatoxin B1) using a highly sensitive planar waveguide transducer in combination with a highly specific aptamer bioreceptor. This sensor is built on a SiO2–Si3N4–SiO2 optical planar waveguide (OPW) operating as a polarization interferometer (PI), which detects a phase shift between p- and s-components of polarized light propagating through the waveguide caused by the molecular adsorption. The refractive index sensitivity (RIS) of the recently upgraded PI experimental setup has been improved and reached values of around 9600 rad per refractive index unity (RIU), the highest RIS values reported, which enables the detection of low molecular weight analytes such as mycotoxins in very low concentrations. The biosensing tests yielded remarkable results for the detection of aflatoxin B1 in a wide range of concentrations from 1 pg/mL to 1 μg/mL in direct assay with specific DNA-based aptamers